Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase | AO062_30360 | Not Available | Negative | 6633050 - 6633889 | 31587.7 |
| urocanate hydratase | AO062_30365 | Not Available | Negative | 6633961 - 6635688 | 62631.7 |
| histidine ammonia-lyase | AO062_30370 | Not Available | Negative | 6635726 - 6637288 | 53666.9 |
| histidine utilization repressor | AO062_30375 | Not Available | Negative | 6637468 - 6638205 | 27565.9 |
| sulfonate abc transporter atp-binding protein | AO062_30380 | Not Available | Negative | 6638213 - 6639007 | 29389.5 |
| abc transporter permease | AO062_30385 | Not Available | Negative | 6638992 - 6639828 | 29712.3 |
| abc transporter permease | AO062_30390 | Not Available | Negative | 6639851 - 6640819 | 33808.8 |
| atp-dependent dna helicase recq | AO062_30395 | Not Available | Positive | 6641201 - 6643036 | 67108.2 |
| lysr family transcriptional regulator | AO062_30400 | Not Available | Negative | 6643047 - 6643949 | 32203.1 |
| 2-hydroxy-acid oxidase | AO062_30405 | Not Available | Positive | 6644070 - 6645305 | 43971.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
