Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_30055 | Not Available | Negative | 6575633 - 6576700 | 39222.9 |
| hypothetical protein | AO062_30060 | Not Available | Negative | 6576708 - 6579920 | 118259.0 |
| hypothetical protein | AO062_30065 | Not Available | Negative | 6579959 - 6581071 | 40850.2 |
| hypothetical protein | AO062_30070 | Not Available | Negative | 6581086 - 6581790 | 24546.7 |
| mfs transporter | AO062_30080 | Not Available | Negative | 6583197 - 6584510 | 47369.1 |
| alcohol dehydrogenase | AO062_30085 | Not Available | Negative | 6584625 - 6585719 | 38459.3 |
| lysr family transcriptional regulator | AO062_30090 | Not Available | Positive | 6585896 - 6586780 | 32550.5 |
| 4-coumarate--coa ligase | AO062_30095 | Not Available | Positive | 6586868 - 6588421 | 55599.4 |
| citrate transporter | AO062_30100 | Not Available | Positive | 6588422 - 6589543 | 39812.9 |
| arac family transcriptional regulator | AO062_30105 | Not Available | Positive | 6589582 - 6590274 | 25097.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
