Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin | AO062_29950 | Not Available | Negative | 6552561 - 6554633 | 75236.1 |
| hypothetical protein | AO062_29955 | Not Available | Positive | 6554850 - 6556337 | 53362.9 |
| beta-hexosaminidase | AO062_29960 | Not Available | Positive | 6556334 - 6557626 | 46363.3 |
| penicillin-binding protein | AO062_29965 | Not Available | Positive | 6557637 - 6560030 | 86506.3 |
| hypothetical protein | AO062_29970 | Not Available | Positive | 6560243 - 6560848 | 22640.4 |
| fatty acid desaturase | AO062_29975 | Not Available | Positive | 6560858 - 6561772 | 34756.3 |
| histidine kinase | AO062_29980 | Not Available | Negative | 6561766 - 6563205 | 53944.0 |
| transcriptional regulator | AO062_29985 | Not Available | Negative | 6563330 - 6564121 | 29053.8 |
| gtpase | AO062_29990 | Not Available | Positive | 6564690 - 6565640 | 33224.1 |
| merr family transcriptional regulator | AO062_29995 | Not Available | Negative | 6565753 - 6566172 | 15533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
