Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion protein tolc | AO062_29850 | Not Available | Positive | 6532194 - 6533528 | 46741.1 |
| atp-binding protein | AO062_29855 | Not Available | Positive | 6533525 - 6535717 | 78952.2 |
| secretion protein hlyd | AO062_29860 | Not Available | Positive | 6535714 - 6536961 | 45309.4 |
| hypothetical protein | AO062_29865 | Not Available | Positive | 6537026 - 6537469 | 16461.7 |
| hypothetical protein | AO062_29870 | Not Available | Positive | 6537493 - 6537882 | 14243.3 |
| hypothetical protein | AO062_29875 | Not Available | Positive | 6539244 - 6539768 | 18205.1 |
| hypothetical protein | AO062_29880 | Not Available | Positive | 6539881 - 6540393 | 17763.4 |
| serine/threonine protein phosphatase | AO062_29885 | Not Available | Positive | 6540578 - 6541774 | 42907.4 |
| hypothetical protein | AO062_29890 | Not Available | Negative | 6541796 - 6542296 | 17575.0 |
| hypothetical protein | AO062_29895 | Not Available | Negative | 6542414 - 6543391 | 35237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
