Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO062_29745 | Not Available | Positive | 6503370 - 6504344 | 33726.1 |
| cytochrome | AO062_29750 | Not Available | Positive | 6504355 - 6505891 | 57558.1 |
| azurin | AO062_29760 | Not Available | Positive | 6506757 - 6507209 | 15487.9 |
| histidine kinase | AO062_29765 | Not Available | Negative | 6507202 - 6509028 | 66457.2 |
| luxr family transcriptional regulator | AO062_29770 | Not Available | Negative | 6509043 - 6509756 | 25970.5 |
| short-chain dehydrogenase | AO062_29775 | Not Available | Negative | 6509870 - 6510682 | 27634.4 |
| hypothetical protein | AO062_29780 | Not Available | Negative | 6510783 - 6511163 | 13932.6 |
| hypothetical protein | AO062_29785 | Not Available | Negative | 6511145 - 6512455 | 47445.9 |
| molybdenum cofactor biosysynthesis protein | AO062_29790 | Not Available | Positive | 6512569 - 6513081 | 17877.0 |
| alpha/beta hydrolase | AO062_29795 | Not Available | Negative | 6513089 - 6513889 | 29771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
