Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_02950 | Not Available | Negative | 605925 - 606914 | 36514.6 |
| ribosomal protein l7/l12 | AO062_02955 | Not Available | Negative | 606919 - 607440 | 17804.2 |
| abc transporter | AO062_02960 | Not Available | Negative | 607500 - 608222 | 25579.8 |
| arylesterase | AO062_02965 | Not Available | Positive | 608238 - 608894 | 22851.6 |
| hypothetical protein | AO062_02970 | Not Available | Negative | 608986 - 609189 | 7463.78 |
| cystathionine beta-lyase | AO062_02975 | Not Available | Negative | 609546 - 610739 | 42995.4 |
| peptidase | AO062_02980 | Not Available | Positive | 610874 - 611629 | 26243.2 |
| arac family transcriptional regulator | AO062_02985 | Not Available | Positive | 611709 - 612590 | 31365.5 |
| glyxoylase | AO062_02990 | Not Available | Positive | 612666 - 613136 | 17134.2 |
| nicotinate phosphoribosyltransferase | AO062_02995 | Not Available | Negative | 613168 - 613692 | 19613.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
