Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein impa | AO062_29535 | Not Available | Positive | 6448193 - 6449224 | 36125.8 |
| hypothetical protein | AO062_29540 | Not Available | Positive | 6449274 - 6449786 | 18375.1 |
| evpb family type vi secretion protein | AO062_29545 | Not Available | Positive | 6449840 - 6451333 | 55217.1 |
| type vi secretion protein | AO062_29550 | Not Available | Positive | 6451486 - 6451965 | 16926.6 |
| hypothetical protein | AO062_29555 | Not Available | Positive | 6452054 - 6452554 | 18540.9 |
| serine/threonine protein phosphatase | AO062_29560 | Not Available | Negative | 6452626 - 6453420 | 28296.4 |
| hypothetical protein | AO062_29565 | Not Available | Negative | 6453461 - 6455131 | 57155.1 |
| type vi secretion protein | AO062_29570 | Not Available | Negative | 6455246 - 6455641 | 13407.7 |
| hypothetical protein | AO062_29575 | Not Available | Negative | 6455653 - 6456324 | 23975.0 |
| hypothetical protein | AO062_29580 | Not Available | Negative | 6456352 - 6457404 | 37601.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
