Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosynthesis protein f | AO062_29370 | Not Available | Positive | 6417744 - 6418544 | 29420.4 |
| ketosteroid isomerase | AO062_29375 | Not Available | Positive | 6418571 - 6418963 | 14570.4 |
| aldehyde dehydrogenase | AO062_29380 | Not Available | Positive | 6419001 - 6420503 | 52694.1 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_29385 | Not Available | Positive | 6420547 - 6421812 | 44458.2 |
| branched-chain amino acid abc transporter permease | AO062_29390 | Not Available | Positive | 6421825 - 6422694 | 30170.8 |
| abc transporter permease | AO062_29395 | Not Available | Positive | 6422718 - 6423761 | 35998.9 |
| branched-chain amino acid abc transporter atp-binding protein | AO062_29400 | Not Available | Positive | 6423758 - 6424465 | 24802.3 |
| branched-chain amino acid abc transporter atp-binding protein | AO062_29405 | Not Available | Positive | 6424473 - 6425180 | 24472.2 |
| lysr family transcriptional regulator | AO062_29410 | Not Available | Negative | 6425177 - 6426109 | 34028.3 |
| abc transporter substrate-binding protein | AO062_29415 | Not Available | Positive | 6426320 - 6427261 | 32953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
