Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | AO062_28905 | Not Available | Positive | 6307232 - 6308281 | 36577.7 |
| thiosulfate oxidation carrier protein soxy | AO062_28910 | Not Available | Positive | 6308301 - 6308759 | 15619.8 |
| thiosulfate oxidation carrier complex protein soxz | AO062_28915 | Not Available | Positive | 6308819 - 6309118 | 10778.9 |
| sulfur oxidation c-type cytochrome soxa | AO062_28920 | Not Available | Positive | 6309194 - 6309997 | 28881.7 |
| sulfur oxidation c-type cytochrome soxx | AO062_28925 | Not Available | Positive | 6310010 - 6310663 | 23566.8 |
| thiosulfohydrolase soxb | AO062_28930 | Not Available | Positive | 6310683 - 6312407 | 62233.1 |
| transporter | AO062_28935 | Not Available | Positive | 6312450 - 6313565 | 38308.5 |
| hypothetical protein | AO062_28940 | Not Available | Positive | 6313750 - 6314745 | 35556.8 |
| hypothetical protein | AO062_28945 | Not Available | Positive | 6314754 - 6315101 | 12605.9 |
| hypothetical protein | AO062_28950 | Not Available | Negative | 6315121 - 6316194 | 38199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
