Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | AO062_28645 | Not Available | Positive | 6234194 - 6235234 | 35536.1 |
| large-conductance mechanosensitive channel | AO062_28650 | Not Available | Negative | 6235257 - 6235688 | 15343.3 |
| sugar transporter | AO062_28655 | Not Available | Positive | 6236361 - 6237515 | 40825.1 |
| udp-glucose 6-dehydrogenase | AO062_28660 | Not Available | Positive | 6241189 - 6242361 | 42819.5 |
| udp-glucose 4-epimerase | AO062_28665 | Not Available | Positive | 6243511 - 6244557 | 38702.4 |
| capsular biosynthesis protein | AO062_28670 | Not Available | Positive | 6244562 - 6245689 | 41166.9 |
| udp-n-acetylglucosamine 2-epimerase | AO062_28675 | Not Available | Positive | 6245715 - 6246851 | 42629.2 |
| glycosyltransferase | AO062_28680 | Not Available | Positive | 6246855 - 6248090 | 44839.0 |
| hypothetical protein | AO062_28685 | Not Available | Positive | 6248087 - 6248692 | 22944.1 |
| acetyltransferase | AO062_28690 | Not Available | Positive | 6248689 - 6249348 | 23443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
