Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | AO062_28475 | Not Available | Negative | 6186657 - 6188501 | 65671.8 |
| hypothetical protein | AO062_28480 | Not Available | Negative | 6188593 - 6188886 | 10902.2 |
| mur ligase | AO062_28485 | Not Available | Negative | 6188883 - 6191972 | 113810.0 |
| hypothetical protein | AO062_28490 | Not Available | Negative | 6192084 - 6192581 | 18344.8 |
| hypothetical protein | AO062_28495 | Not Available | Negative | 6192671 - 6196903 | 129436.0 |
| hypothetical protein | AO062_28500 | Not Available | Positive | 6197394 - 6197828 | 16315.2 |
| lysr family transcriptional regulator | AO062_28505 | Not Available | Negative | 6197833 - 6198792 | 33585.1 |
| protocatechuate 3,4-dioxygenase | AO062_28510 | Not Available | Positive | 6198932 - 6199654 | 27228.1 |
| protocatechuate 3,4-dioxygenase | AO062_28515 | Not Available | Positive | 6199667 - 6200278 | 22217.0 |
| aaa family atpase | AO062_28530 | Not Available | Positive | 6201134 - 6201988 | 32553.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
