Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_28420 | Not Available | Positive | 6171802 - 6173175 | 47920.3 |
| histidine kinase | AO062_28425 | Not Available | Positive | 6173217 - 6174500 | 45997.2 |
| pilus assembly protein cpaf | AO062_28430 | Not Available | Positive | 6174504 - 6175820 | 48743.5 |
| secretion system protein | AO062_28435 | Not Available | Positive | 6175813 - 6176817 | 36344.0 |
| secretion system protein | AO062_28440 | Not Available | Positive | 6176814 - 6177773 | 35264.6 |
| pilus assembly protein tade | AO062_28450 | Not Available | Positive | 6179154 - 6179624 | 17060.8 |
| hypothetical protein | AO062_28455 | Not Available | Positive | 6180574 - 6182085 | 52428.9 |
| fis family transcriptional regulator | AO062_28460 | Not Available | Positive | 6182144 - 6183559 | 51927.2 |
| transporter | AO062_28465 | Not Available | Negative | 6183691 - 6185265 | 56744.4 |
| secretion protein hyld | AO062_28470 | Not Available | Negative | 6185262 - 6186578 | 47800.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
