Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoadipyl coa thiolase | AO062_28370 | Not Available | Negative | 6162106 - 6163311 | 41743.4 |
| 3-oxoadipate coa-transferase | AO062_28375 | Not Available | Negative | 6163342 - 6163989 | 22804.6 |
| 3-oxoadipate coa-transferase | AO062_28380 | Not Available | Negative | 6164044 - 6164745 | 24602.7 |
| iclr family transcriptional regulator | AO062_28385 | Not Available | Positive | 6164883 - 6165680 | 28431.5 |
| receptor | AO062_28390 | Not Available | Negative | 6165714 - 6166718 | 34313.9 |
| hypothetical protein | AO062_28395 | Not Available | Positive | 6166924 - 6168099 | 40906.7 |
| hypothetical protein | AO062_28400 | Not Available | Positive | 6168066 - 6169574 | 54411.8 |
| pilus assembly protein | AO062_28405 | Not Available | Positive | 6169987 - 6170169 | 6202.77 |
| peptidase a24 | AO062_28410 | Not Available | Positive | 6170172 - 6170669 | 17758.5 |
| pilus assembly protein cpab | AO062_28415 | Not Available | Positive | 6170752 - 6171753 | 34957.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
