Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_28010 | Not Available | Positive | 6072957 - 6073796 | 28964.4 |
| lysr family transcriptional regulator | AO062_28015 | Not Available | Positive | 6073853 - 6074740 | 32880.7 |
| hypothetical protein | AO062_28020 | Not Available | Positive | 6074849 - 6075547 | 24282.7 |
| hypothetical protein | AO062_28025 | Not Available | Positive | 6075637 - 6076932 | 44822.9 |
| hypothetical protein | AO062_28030 | Not Available | Positive | 6076981 - 6077961 | 33919.2 |
| iclr family transcriptional regulator | AO062_28035 | Not Available | Positive | 6078092 - 6078931 | 30612.4 |
| fmn-dependent dehydrogenase | AO062_28040 | Not Available | Negative | 6078980 - 6080146 | 42319.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AO062_28045 | Not Available | Negative | 6080159 - 6081061 | 32422.4 |
| abc transporter permease | AO062_28050 | Not Available | Negative | 6081104 - 6082882 | 64112.4 |
| spermidine/putrescine abc transporter atp-binding protein | AO062_28055 | Not Available | Negative | 6082887 - 6083972 | 39467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
