Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AO062_27445 | Not Available | Positive | 5954680 - 5955444 | 29242.1 |
| hypothetical protein | AO062_27450 | Not Available | Negative | 5955457 - 5955915 | 16482.6 |
| lysr family transcriptional regulator | AO062_27455 | Not Available | Negative | 5955936 - 5956916 | 35580.0 |
| omega amino acid--pyruvate aminotransferase | AO062_27460 | Not Available | Positive | 5957023 - 5958378 | 48302.8 |
| methylmalonate-semialdehyde dehydrogenase | AO062_27465 | Not Available | Positive | 5958401 - 5959918 | 53873.7 |
| fad-dependent oxidoreductase | AO062_27470 | Not Available | Negative | 5959934 - 5961322 | 50184.2 |
| phosphohydrolase | AO062_27475 | Not Available | Negative | 5961332 - 5961904 | 20826.7 |
| hypothetical protein | AO062_27490 | Not Available | Negative | 5963027 - 5963845 | 26909.8 |
| d-alanyl-d-alanine carboxypeptidase | AO062_27495 | Not Available | Positive | 5964042 - 5964848 | 30094.4 |
| hypothetical protein | AO062_27500 | Not Available | Positive | 5964909 - 5965202 | 10462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
