Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | AO062_27245 | Not Available | Positive | 5913896 - 5915914 | 71414.7 |
| 30s ribosomal protein s1 | AO062_27250 | Not Available | Positive | 5916147 - 5917835 | 61839.8 |
| integration host factor subunit beta | AO062_27255 | Not Available | Positive | 5917916 - 5918242 | 12048.4 |
| hypothetical protein | AO062_27260 | Not Available | Positive | 5918385 - 5918720 | 11760.4 |
| hypothetical protein | AO062_27265 | Not Available | Positive | 5918710 - 5919897 | 44028.7 |
| hypothetical protein | AO062_27270 | Not Available | Positive | 5920035 - 5920367 | 11379.8 |
| c4-dicarboxylate abc transporter substrate-binding protein | AO062_27275 | Not Available | Positive | 5920530 - 5921498 | 34634.5 |
| c4-dicarboxylate abc transporter permease | AO062_27280 | Not Available | Positive | 5921502 - 5922035 | 19598.1 |
| c4-dicarboxylate abc transporter permease | AO062_27285 | Not Available | Positive | 5922072 - 5923370 | 46497.6 |
| protein crcb | AO062_27290 | Not Available | Positive | 5923396 - 5923782 | 13059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
