Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase | AO062_27140 | Not Available | Negative | 5879551 - 5880885 | 48402.4 |
| c4-dicarboxylate transporter | AO062_27145 | Not Available | Negative | 5880905 - 5882248 | 47850.9 |
| lipoyl synthase | AO062_27150 | Not Available | Negative | 5882267 - 5883214 | 34591.4 |
| malic enzyme | AO062_27155 | Not Available | Negative | 5883228 - 5885513 | 81278.4 |
| alpha/beta hydrolase | AO062_27160 | Not Available | Negative | 5885533 - 5886333 | 28849.4 |
| dihydrolipoamide dehydrogenase | AO062_27165 | Not Available | Negative | 5886342 - 5888096 | 60814.0 |
| dihydrolipoamide acetyltransferase | AO062_27170 | Not Available | Negative | 5888110 - 5889705 | 55089.5 |
| pyruvate dehydrogenase | AO062_27175 | Not Available | Negative | 5889719 - 5892391 | 99671.8 |
| hypothetical protein | AO062_27180 | Not Available | Negative | 5892666 - 5893622 | 34920.9 |
| hypothetical protein | AO062_27185 | Not Available | Positive | 5894017 - 5895906 | 68636.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
