Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase | AO062_26475 | Not Available | Positive | 5739043 - 5739591 | 18407.4 |
| amp nucleosidase | AO062_26480 | Not Available | Positive | 5739651 - 5741168 | 56680.7 |
| twin-arginine translocation pathway signal protein | AO062_26485 | Not Available | Positive | 5741346 - 5742305 | 32975.5 |
| hypothetical protein | AO062_26490 | Not Available | Negative | 5742343 - 5743083 | 26671.3 |
| arsr family transcriptional regulator | AO062_26495 | Not Available | Negative | 5743473 - 5744168 | 24967.9 |
| cytochrome | AO062_26500 | Not Available | Positive | 5744252 - 5745415 | 40752.0 |
| pyridoxamine 5'-phosphate oxidase | AO062_26505 | Not Available | Negative | 5745417 - 5746382 | 34388.0 |
| glutathione s-transferase | AO062_26510 | Not Available | Negative | 5746379 - 5747044 | 24115.0 |
| lysr family transcriptional regulator | AO062_26515 | Not Available | Positive | 5747150 - 5748040 | 32573.5 |
| nodulation factor abc transporter atp-binding protein nodi | AO062_26520 | Not Available | Positive | 5748079 - 5749044 | 34991.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
