Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein | AO062_02640 | Not Available | Negative | 538193 - 538525 | 11867.6 |
| dna polymerase iii subunit gamma/tau | AO062_02645 | Not Available | Negative | 538599 - 540446 | 66204.2 |
| acetyltransferase | AO062_02650 | Not Available | Positive | 540769 - 541191 | 16226.3 |
| nad(fad)-utilizing dehydrogenase | AO062_02655 | Not Available | Negative | 541204 - 542442 | 42805.4 |
| dna helicase uvrd | AO062_02660 | Not Available | Negative | 542439 - 545711 | 119333.0 |
| exonuclease | AO062_02665 | Not Available | Negative | 545708 - 548263 | 92042.7 |
| thioredoxin | AO062_02670 | Not Available | Positive | 548424 - 548756 | 12043.6 |
| transcription termination factor rho | AO062_02675 | Not Available | Positive | 548939 - 550204 | 47484.9 |
| oxidoreductase | AO062_02680 | Not Available | Negative | 550259 - 551326 | 38389.5 |
| 50s ribosomal protein l31 type b | AO062_02685 | Not Available | Positive | 551528 - 551788 | 9754.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
