Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | AO062_26125 | Not Available | Positive | 5672930 - 5673652 | 26916.3 |
| 2-hydroxychromene-2-carboxylate isomerase | AO062_26130 | Not Available | Positive | 5673698 - 5674306 | 22596.2 |
| hypothetical protein | AO062_26135 | Not Available | Positive | 5674367 - 5675557 | 42846.7 |
| leucine/isoleucine/valine transporter atp-binding subunit | AO062_26140 | Not Available | Positive | 5675574 - 5676341 | 27462.5 |
| abc transporter atp-binding protein | AO062_26145 | Not Available | Positive | 5676338 - 5677054 | 25872.4 |
| abc transporter permease | AO062_26150 | Not Available | Positive | 5677075 - 5677947 | 30109.9 |
| hypothetical protein | AO062_26155 | Not Available | Positive | 5677950 - 5678954 | 35330.6 |
| hypothetical protein | AO062_26160 | Not Available | Positive | 5678964 - 5679269 | 10308.7 |
| type vi secretion protein | AO062_26165 | Not Available | Negative | 5679262 - 5681244 | 73206.2 |
| peptidase | AO062_26170 | Not Available | Negative | 5681705 - 5682301 | 21073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
