Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbj | AO062_26020 | Not Available | Negative | 5649408 - 5650136 | 26726.0 |
| conjugal transfer protein trbe | AO062_26025 | Not Available | Negative | 5650133 - 5652571 | 89782.0 |
| conjugal transfer protein trbd | AO062_26030 | Not Available | Negative | 5652581 - 5652853 | 9710.12 |
| conjugal transfer protein trbc | AO062_26035 | Not Available | Negative | 5652850 - 5653233 | 13275.7 |
| copg family transcriptional regulator | AO062_26045 | Not Available | Negative | 5654265 - 5654711 | 16805.0 |
| conjugal transfer protein trag | AO062_26050 | Not Available | Negative | 5654708 - 5656714 | 73258.4 |
| d-alanyl-d-alanine endopeptidase | AO062_26055 | Not Available | Negative | 5657185 - 5658099 | 33551.6 |
| electron transfer flavoprotein subunit beta | AO062_26060 | Not Available | Negative | 5658117 - 5659061 | 31299.2 |
| electron transporter rnfb | AO062_26065 | Not Available | Negative | 5659063 - 5659812 | 26542.5 |
| acyl-coa dehydrogenase | AO062_26070 | Not Available | Negative | 5659837 - 5661618 | 62700.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
