Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | AO062_02590 | Not Available | Negative | 528768 - 529217 | 16549.9 |
| methyltransferase type 11 | AO062_02595 | Not Available | Negative | 529284 - 530024 | 27914.7 |
| hydroxyacylglutathione hydrolase | AO062_02600 | Not Available | Positive | 530044 - 530823 | 27897.3 |
| lytic transglycosylase | AO062_02605 | Not Available | Positive | 530820 - 532424 | 57801.9 |
| potassium transporter | AO062_02610 | Not Available | Positive | 532489 - 534249 | 61905.9 |
| abc transporter permease | AO062_02615 | Not Available | Negative | 534277 - 535110 | 30239.6 |
| mannosyltransferase | AO062_02620 | Not Available | Negative | 535107 - 535922 | 29859.0 |
| abc transporter substrate-binding protein | AO062_02625 | Not Available | Negative | 535975 - 537012 | 36317.9 |
| glutathione metabolism protein | AO062_02630 | Not Available | Negative | 537151 - 537543 | 14219.6 |
| recombination protein recr | AO062_02635 | Not Available | Negative | 537595 - 538185 | 21079.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
