Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_25820 | Not Available | Positive | 5603162 - 5603692 | 19415.3 |
| hypothetical protein | AO062_25825 | Not Available | Positive | 5603830 - 5604825 | 36920.2 |
| amidase | AO062_25830 | Not Available | Positive | 5604927 - 5606381 | 51977.7 |
| hypothetical protein | AO062_25835 | Not Available | Positive | 5606438 - 5607421 | 34769.6 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_25840 | Not Available | Positive | 5607811 - 5608863 | 37801.9 |
| abc transporter atp-binding protein | AO062_25845 | Not Available | Positive | 5608860 - 5609615 | 26747.6 |
| abc transporter atp-binding protein | AO062_25850 | Not Available | Positive | 5609602 - 5610300 | 25065.6 |
| abc transporter permease | AO062_25855 | Not Available | Positive | 5610314 - 5611180 | 30564.4 |
| abc transporter permease | AO062_25860 | Not Available | Positive | 5611191 - 5612222 | 36580.5 |
| acetoin utilization protein | AO062_25865 | Not Available | Positive | 5612219 - 5613331 | 40133.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
