Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_25670 | Not Available | Negative | 5572041 - 5572967 | 33657.2 |
| coa-transferase | AO062_25675 | Not Available | Negative | 5573007 - 5574197 | 42812.9 |
| 3-hydroxy-3-methylglutaryl-coa lyase | AO062_25680 | Not Available | Negative | 5574190 - 5575125 | 32564.7 |
| iclr family transcriptional regulator | AO062_25685 | Not Available | Positive | 5575215 - 5575955 | 26419.5 |
| abc transporter substrate-binding protein | AO062_25690 | Not Available | Negative | 5575959 - 5576927 | 33578.7 |
| aspartate aminotransferase | AO062_25695 | Not Available | Negative | 5576981 - 5577958 | 34335.0 |
| malate synthase g | AO062_25700 | Not Available | Positive | 5578220 - 5580394 | 77835.2 |
| mfs transporter | AO062_25705 | Not Available | Positive | 5580546 - 5581832 | 45192.0 |
| hypothetical protein | AO062_25710 | Not Available | Negative | 5581863 - 5582972 | 42325.8 |
| transporter | AO062_25715 | Not Available | Negative | 5583144 - 5583584 | 15545.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
