Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemagglutinin | AO062_25420 | Not Available | Negative | 5515125 - 5520605 | 179310.0 |
| peptide abc transporter permease | AO062_25425 | Not Available | Negative | 5520608 - 5522368 | 62963.7 |
| hypothetical protein | AO062_25430 | Not Available | Negative | 5522371 - 5524557 | 77996.2 |
| hydroperoxidase | AO062_25435 | Not Available | Negative | 5524709 - 5526898 | 80169.1 |
| succinylglutamate desuccinylase | AO062_25440 | Not Available | Negative | 5527244 - 5528236 | 35690.4 |
| hypothetical protein | AO062_25445 | Not Available | Positive | 5528400 - 5528633 | 8702.97 |
| ribulose phosphate epimerase | AO062_25450 | Not Available | Negative | 5528623 - 5529318 | 24544.3 |
| protein apag | AO062_25455 | Not Available | Positive | 5529379 - 5529774 | 14136.7 |
| recombinase | AO062_25460 | Not Available | Positive | 5529897 - 5531870 | 71117.7 |
| sodium:proton exchanger | AO062_25465 | Not Available | Positive | 5531867 - 5533138 | 44256.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
