Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylisocitrate lyase | AO062_25160 | Not Available | Positive | 5460736 - 5461566 | 29018.2 |
| uracil-dna glycosylase | AO062_25165 | Not Available | Positive | 5461578 - 5462237 | 24145.0 |
| hypothetical protein | AO062_25170 | Not Available | Negative | 5462143 - 5463810 | 60739.5 |
| hypothetical protein | AO062_25175 | Not Available | Negative | 5463875 - 5464069 | 7514.05 |
| lysr family transcriptional regulator | AO062_25180 | Not Available | Positive | 5464160 - 5465050 | 31969.2 |
| response regulator receiver protein | AO062_25185 | Not Available | Negative | 5465057 - 5465716 | 24181.4 |
| amino acid abc transporter substrate-binding protein | AO062_25190 | Not Available | Negative | 5465891 - 5467045 | 42688.7 |
| hypothetical protein | AO062_25195 | Not Available | Negative | 5467112 - 5468746 | 59392.8 |
| aaa family atpase | AO062_25200 | Not Available | Negative | 5468743 - 5469561 | 29903.8 |
| hypothetical protein | AO062_25205 | Not Available | Negative | 5469558 - 5470568 | 37240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
