Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | AO062_25060 | Not Available | Negative | 5440281 - 5441066 | 28426.5 |
| metal abc transporter substrate-binding protein | AO062_25065 | Not Available | Negative | 5441063 - 5442010 | 33540.6 |
| tetr family transcriptional regulator | AO062_25070 | Not Available | Negative | 5442007 - 5442786 | 28370.0 |
| acetoacetyl-coa synthetase | AO062_25075 | Not Available | Positive | 5442887 - 5444881 | 73121.0 |
| hypothetical protein | AO062_25080 | Not Available | Positive | 5445000 - 5445356 | 12998.8 |
| guanylate cyclase | AO062_25085 | Not Available | Negative | 5445388 - 5447283 | 68690.4 |
| proline hydroxylase | AO062_25090 | Not Available | Negative | 5447579 - 5448292 | 26138.1 |
| aldehyde-activating protein | AO062_25095 | Not Available | Positive | 5448413 - 5448919 | 18540.1 |
| arac family transcriptional regulator | AO062_25100 | Not Available | Negative | 5448955 - 5449887 | 34646.4 |
| lysr family transcriptional regulator | AO062_25105 | Not Available | Negative | 5449899 - 5450801 | 32717.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
