Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-oxophytodienoate reductase | AO062_24655 | Not Available | Negative | 5360360 - 5361463 | 39073.2 |
| terpene utilization protein atua | AO062_24660 | Not Available | Negative | 5361550 - 5363373 | 63419.0 |
| enoyl-coa hydratase | AO062_24665 | Not Available | Negative | 5363370 - 5364170 | 28692.7 |
| glutathione s-transferase | AO062_24670 | Not Available | Negative | 5364312 - 5364920 | 22400.9 |
| hypothetical protein | AO062_24675 | Not Available | Positive | 5365111 - 5365296 | 6016.92 |
| transglutaminase | AO062_24680 | Not Available | Positive | 5365314 - 5366180 | 31599.0 |
| trna uridine 5-carboxymethylaminomethyl modification protein | AO062_24685 | Not Available | Positive | 5366378 - 5368363 | 72584.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | AO062_24690 | Not Available | Positive | 5368360 - 5369004 | 22455.3 |
| lysine transporter lyse | AO062_24695 | Not Available | Positive | 5369118 - 5369732 | 21513.2 |
| chromosome partitioning protein | AO062_24700 | Not Available | Positive | 5369762 - 5370682 | 32498.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
