Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone oxidoreductase subunit m | AO062_24345 | Not Available | Positive | 5283821 - 5285299 | 53866.4 |
| nadh:ubiquinone oxidoreductase subunit n | AO062_24350 | Not Available | Positive | 5285324 - 5286811 | 52402.8 |
| hypothetical protein | AO062_24355 | Not Available | Positive | 5286828 - 5287133 | 11237.0 |
| adp-ribose pyrophosphatase | AO062_24360 | Not Available | Positive | 5287130 - 5287744 | 22349.4 |
| hypothetical protein | AO062_24365 | Not Available | Positive | 5287752 - 5288237 | 17184.2 |
| abc transporter | AO062_24370 | Not Available | Negative | 5288264 - 5290051 | 63028.2 |
| marr family transcriptional regulator | AO062_24375 | Not Available | Positive | 5290130 - 5290666 | 19954.8 |
| rnd transporter | AO062_24380 | Not Available | Positive | 5290659 - 5292137 | 51763.4 |
| hemolysin d | AO062_24385 | Not Available | Positive | 5292173 - 5293507 | 46168.8 |
| multidrug resistance protein b | AO062_24390 | Not Available | Positive | 5293543 - 5295105 | 55680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
