Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | AO062_24135 | Not Available | Positive | 5236307 - 5237539 | 43558.4 |
| rnd transporter mfp subunit | AO062_24140 | Not Available | Positive | 5237536 - 5239029 | 52708.3 |
| cation transporter | AO062_24145 | Not Available | Positive | 5239026 - 5242193 | 113663.0 |
| hypothetical protein | AO062_24150 | Not Available | Positive | 5242190 - 5242522 | 11639.4 |
| uroporphyrin-iii methyltransferase | AO062_24155 | Not Available | Negative | 5242519 - 5243325 | 27497.3 |
| glycosyl transferase | AO062_24160 | Not Available | Negative | 5243322 - 5244227 | 31965.9 |
| nitrate reductase | AO062_24165 | Not Available | Negative | 5244275 - 5247076 | 100256.0 |
| nitrite reductase | AO062_24170 | Not Available | Negative | 5247084 - 5247488 | 14308.2 |
| hypothetical protein | AO062_24175 | Not Available | Negative | 5247523 - 5248311 | 28167.1 |
| nitrite reductase | AO062_24180 | Not Available | Negative | 5248325 - 5250757 | 89024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
