Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter | AO062_23630 | Not Available | Negative | 5127614 - 5128555 | 33821.4 |
| peptide abc transporter substrate-binding protein | AO062_23635 | Not Available | Negative | 5128697 - 5130289 | 57813.7 |
| marr family transcriptional regulator | AO062_23640 | Not Available | Negative | 5130302 - 5130838 | 20022.5 |
| d-aminoacylase | AO062_23645 | Not Available | Negative | 5131073 - 5132530 | 52182.3 |
| peptide abc transporter substrate-binding protein | AO062_23650 | Not Available | Negative | 5132544 - 5133545 | 36849.6 |
| peptide abc transporter atp-binding protein | AO062_23655 | Not Available | Negative | 5133542 - 5134576 | 37570.9 |
| peptide abc transporter permease | AO062_23660 | Not Available | Negative | 5134590 - 5135504 | 32279.2 |
| peptide abc transporter | AO062_23665 | Not Available | Negative | 5135530 - 5136465 | 33589.2 |
| peptide abc transporter permease | AO062_23670 | Not Available | Negative | 5136481 - 5138058 | 56929.4 |
| microcystin lr degradation protein mlrc-like protein | AO062_23675 | Not Available | Negative | 5138108 - 5139559 | 51531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
