Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO062_23120 | Not Available | Positive | 5026079 - 5026999 | 32133.1 |
| hypothetical protein | AO062_23125 | Not Available | Positive | 5027052 - 5028221 | 41315.0 |
| hypothetical protein | AO062_23130 | Not Available | Positive | 5028306 - 5028683 | 13741.7 |
| hypothetical protein | AO062_23135 | Not Available | Negative | 5028690 - 5029082 | 14585.8 |
| 3-oxoacyl-acp synthase | AO062_23140 | Not Available | Negative | 5029185 - 5030405 | 42817.2 |
| 3-hydroxydecanoyl-acp dehydratase | AO062_23145 | Not Available | Negative | 5030416 - 5030931 | 18513.4 |
| adenosine deaminase | AO062_23150 | Not Available | Positive | 5031166 - 5032233 | 39266.9 |
| mfs transporter | AO062_23155 | Not Available | Negative | 5032194 - 5033507 | 44907.7 |
| lysr family transcriptional regulator | AO062_23160 | Not Available | Positive | 5033614 - 5034567 | 34463.9 |
| arac family transcriptional regulator | AO062_23165 | Not Available | Positive | 5034670 - 5035479 | 29801.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
