Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate oxidoreductase | AO062_23070 | Not Available | Negative | 5010606 - 5012228 | 57763.4 |
| indolepyruvate ferredoxin oxidoreductase | AO062_23075 | Not Available | Negative | 5012246 - 5014405 | 77657.7 |
| lysr family transcriptional regulator | AO062_23080 | Not Available | Positive | 5014493 - 5015407 | 34007.5 |
| hypothetical protein | AO062_23085 | Not Available | Positive | 5015673 - 5016452 | 27457.6 |
| fad-binding molybdopterin dehydrogenase | AO062_23090 | Not Available | Positive | 5016639 - 5018252 | 57978.7 |
| aldehyde oxidase | AO062_23095 | Not Available | Positive | 5018255 - 5020714 | 88204.3 |
| lysr family transcriptional regulator | AO062_23100 | Not Available | Positive | 5020809 - 5021801 | 36478.3 |
| guanine permease | AO062_23105 | Not Available | Positive | 5021878 - 5023275 | 48605.8 |
| abc transporter | AO062_23110 | Not Available | Positive | 5023375 - 5024925 | 55474.2 |
| sugar abc transporter permease | AO062_23115 | Not Available | Positive | 5024912 - 5026075 | 40556.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
