Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | AO062_22915 | Not Available | Negative | 4976107 - 4977507 | 49972.5 |
| abc transporter substrate-binding protein | AO062_22920 | Not Available | Negative | 4977515 - 4979008 | 53755.6 |
| peptide abc transporter atp-binding protein | AO062_22925 | Not Available | Negative | 4979061 - 4979876 | 29508.5 |
| abc transporter | AO062_22930 | Not Available | Negative | 4979885 - 4980877 | 34852.7 |
| peptide abc transporter permease | AO062_22935 | Not Available | Negative | 4980884 - 4981768 | 31006.7 |
| abc transporter permease | AO062_22940 | Not Available | Negative | 4981765 - 4982715 | 34023.0 |
| tartrate dehydrogenase | AO062_22945 | Not Available | Negative | 4982922 - 4984013 | 39697.4 |
| aldo/keto reductase | AO062_22950 | Not Available | Positive | 4984287 - 4985144 | 30533.8 |
| permease | AO062_22955 | Not Available | Negative | 4985162 - 4986652 | 51619.2 |
| gntr family transcriptional regulator | AO062_22960 | Not Available | Negative | 4986875 - 4987636 | 27940.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
