Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcd | AO062_22555 | Not Available | Negative | 4883557 - 4885059 | 53243.1 |
| lactate permease | AO062_22560 | Not Available | Negative | 4885074 - 4886735 | 59263.9 |
| lysr family transcriptional regulator | AO062_22565 | Not Available | Negative | 4886851 - 4887738 | 32450.9 |
| gluconolactonase | AO062_22570 | Not Available | Negative | 4887757 - 4888686 | 33932.0 |
| ammonia channel protein | AO062_22575 | Not Available | Negative | 4888893 - 4890317 | 47980.8 |
| transcriptional regulator | AO062_22580 | Not Available | Negative | 4890347 - 4890685 | 12288.0 |
| hypothetical protein | AO062_22585 | Not Available | Negative | 4890756 - 4891622 | 30626.9 |
| atp-dependent protease | AO062_22590 | Not Available | Positive | 4891840 - 4893378 | 53792.5 |
| serine/threonine protein kinase | AO062_22595 | Not Available | Negative | 4893391 - 4895370 | 69767.9 |
| type vi secretion system protein impm | AO062_22600 | Not Available | Negative | 4895407 - 4896132 | 26162.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
