Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate isomerase | AO062_22455 | Not Available | Positive | 4864803 - 4865210 | 14873.8 |
| 2-oxo-hepta-3-ene-1,7-dioate hydratase | AO062_22460 | Not Available | Positive | 4865228 - 4866031 | 29248.1 |
| alpha-dehydro-beta-deoxy-d-glucarate aldolase | AO062_22465 | Not Available | Positive | 4866043 - 4866864 | 28702.5 |
| polyketide cyclase | AO062_22470 | Not Available | Positive | 4866886 - 4867353 | 16991.2 |
| dihydroxy-acid dehydratase | AO062_22475 | Not Available | Positive | 4867391 - 4869124 | 60203.2 |
| twin-arginine translocation pathway signal protein | AO062_22480 | Not Available | Positive | 4869162 - 4870154 | 34476.6 |
| aldolase | AO062_22485 | Not Available | Positive | 4870173 - 4870961 | 28564.2 |
| 2-dehydropantoate 2-reductase | AO062_22490 | Not Available | Positive | 4870975 - 4871952 | 34194.8 |
| hypothetical protein | AO062_22495 | Not Available | Negative | 4871968 - 4872762 | 28330.6 |
| transcriptional regulator | AO062_22500 | Not Available | Negative | 4873098 - 4873811 | 25303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
