Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | AO062_22405 | Not Available | Positive | 4855481 - 4857181 | 62510.1 |
| abc transporter substrate-binding protein | AO062_22410 | Not Available | Positive | 4857178 - 4858182 | 34518.7 |
| marr family transcriptional regulator | AO062_22415 | Not Available | Positive | 4858270 - 4858707 | 16397.9 |
| fumarylacetoacetate hydrolase | AO062_22420 | Not Available | Positive | 4858704 - 4859336 | 22192.8 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | AO062_22425 | Not Available | Positive | 4859333 - 4860103 | 28373.9 |
| abc transporter substrate-binding protein | AO062_22430 | Not Available | Positive | 4860150 - 4861151 | 35088.4 |
| 2-hydroxymuconic semialdehyde dehydrogenase | AO062_22435 | Not Available | Positive | 4861189 - 4862655 | 52390.9 |
| laci family transcriptional regulator | AO062_22440 | Not Available | Positive | 4862658 - 4863626 | 33585.7 |
| aromatic ring-opening dioxygenase liga | AO062_22445 | Not Available | Positive | 4863630 - 4863965 | 12154.6 |
| extradiol ring-cleavage dioxygenase | AO062_22450 | Not Available | Positive | 4863962 - 4864789 | 30161.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
