Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | AO062_22205 | Not Available | Negative | 4813396 - 4814169 | 27688.4 |
| iclr family transcriptional regulator | AO062_22210 | Not Available | Negative | 4814166 - 4815029 | 30308.4 |
| mbl fold metallo-hydrolase | AO062_22215 | Not Available | Positive | 4815179 - 4816138 | 35211.7 |
| fad-dependent oxidoreductase | AO062_22220 | Not Available | Positive | 4816203 - 4817840 | 60048.9 |
| hypothetical protein | AO062_22225 | Not Available | Positive | 4817846 - 4818040 | 6962.17 |
| homogentisate 1,2-dioxygenase | AO062_22230 | Not Available | Positive | 4818087 - 4819397 | 48015.9 |
| abc transporter substrate-binding protein | AO062_22235 | Not Available | Positive | 4819400 - 4820380 | 33655.0 |
| fumarylacetoacetase | AO062_22240 | Not Available | Positive | 4820407 - 4821672 | 45070.7 |
| penicillin-binding protein | AO062_22245 | Not Available | Negative | 4821713 - 4823710 | 72313.5 |
| rod shape-determining protein mred | AO062_22250 | Not Available | Negative | 4823858 - 4824379 | 19145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
