Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease | AO062_22155 | Not Available | Positive | 4803995 - 4804270 | 10262.5 |
| choline dehydrogenase | AO062_22160 | Not Available | Negative | 4804572 - 4806206 | 59815.0 |
| methylmalonate-semialdehyde dehydrogenase | AO062_22165 | Not Available | Negative | 4806274 - 4807791 | 53917.0 |
| lysr family transcriptional regulator | AO062_22170 | Not Available | Positive | 4807878 - 4808786 | 32665.6 |
| abc transporter permease | AO062_22175 | Not Available | Positive | 4808920 - 4810092 | 41529.0 |
| iron abc transporter atp-binding protein | AO062_22180 | Not Available | Positive | 4810089 - 4810943 | 30423.0 |
| mammalian cell entry protein | AO062_22185 | Not Available | Positive | 4810952 - 4811908 | 33466.7 |
| hypothetical protein | AO062_22190 | Not Available | Positive | 4811926 - 4812615 | 24522.4 |
| hypothetical protein | AO062_22195 | Not Available | Positive | 4812656 - 4812877 | 7356.27 |
| aldehyde-activating protein | AO062_22200 | Not Available | Positive | 4812897 - 4813391 | 18274.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
