Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO062_21850 | Not Available | Positive | 4739734 - 4740939 | 42619.0 |
| abc transporter permease | AO062_21855 | Not Available | Positive | 4740956 - 4741876 | 31734.7 |
| branched-chain amino acid abc transporter permease | AO062_21860 | Not Available | Positive | 4741873 - 4742862 | 34577.2 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_21865 | Not Available | Positive | 4742859 - 4743614 | 26945.7 |
| abc transporter atp-binding protein | AO062_21870 | Not Available | Positive | 4743611 - 4744339 | 26181.9 |
| methyltransferase type 12 | AO062_21875 | Not Available | Negative | 4744362 - 4744970 | 21912.2 |
| 3-oxoacyl-acp reductase | AO062_21880 | Not Available | Negative | 4744988 - 4745692 | 24744.6 |
| hypothetical protein | AO062_21885 | Not Available | Negative | 4745726 - 4746364 | 23465.3 |
| glutathione s-transferase | AO062_21890 | Not Available | Negative | 4746368 - 4746976 | 22185.6 |
| palmitoyl-coa hydrolase | AO062_21895 | Not Available | Negative | 4747020 - 4747934 | 33585.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
