Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AO062_21800 | Not Available | Negative | 4724546 - 4725286 | 27616.3 |
| fad-dependent oxidoreductase | AO062_21805 | Not Available | Negative | 4725315 - 4727084 | 63480.4 |
| carbohydrate kinase | AO062_21810 | Not Available | Negative | 4727081 - 4728568 | 50466.7 |
| transporter | AO062_21815 | Not Available | Positive | 4728749 - 4729795 | 37312.9 |
| d-ribose transporter atp-binding protein | AO062_21820 | Not Available | Positive | 4729792 - 4731324 | 54276.8 |
| abc transporter permease | AO062_21825 | Not Available | Positive | 4731321 - 4732361 | 36162.6 |
| aldo/keto reductase | AO062_21830 | Not Available | Positive | 4732358 - 4733356 | 35628.5 |
| aldolase | AO062_21835 | Not Available | Positive | 4733407 - 4734258 | 31174.6 |
| hypothetical protein | AO062_21840 | Not Available | Positive | 4734470 - 4739191 | 165991.0 |
| atp synthase f0f1 subunit c | AO062_21845 | Not Available | Positive | 4739337 - 4739576 | 8127.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
