Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion transporter | AO062_21450 | Not Available | Positive | 4648573 - 4649505 | 34340.8 |
| impact family protein | AO062_21455 | Not Available | Negative | 4649450 - 4650037 | 20481.8 |
| methionine biosynthesis protein metw | AO062_21460 | Not Available | Negative | 4650075 - 4650662 | 21868.4 |
| homoserine o-acetyltransferase | AO062_21465 | Not Available | Negative | 4650659 - 4651816 | 42498.3 |
| hypothetical protein | AO062_21470 | Not Available | Negative | 4651944 - 4652507 | 20211.5 |
| rna-binding protein | AO062_21475 | Not Available | Positive | 4652963 - 4653499 | 16309.7 |
| short-chain dehydrogenase | AO062_21480 | Not Available | Negative | 4653609 - 4654394 | 27436.0 |
| lps export abc transporter periplasmic protein lptc | AO062_21485 | Not Available | Negative | 4654438 - 4655088 | 23833.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | AO062_21490 | Not Available | Negative | 4655085 - 4655633 | 19679.7 |
| arabinose 5-phosphate isomerase | AO062_21495 | Not Available | Negative | 4655633 - 4656634 | 34704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
