Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase | AO062_21345 | Not Available | Negative | 4623126 - 4624265 | 39798.8 |
| fumarate reductase | AO062_21350 | Not Available | Negative | 4624262 - 4625872 | 57732.3 |
| spermidine synthase | AO062_21355 | Not Available | Negative | 4625990 - 4627531 | 56223.8 |
| hypothetical protein | AO062_21360 | Not Available | Negative | 4627543 - 4627761 | 7825.02 |
| hypothetical protein | AO062_21365 | Not Available | Negative | 4627822 - 4629303 | 52960.1 |
| hypothetical protein | AO062_21370 | Not Available | Negative | 4629410 - 4630459 | 37869.7 |
| malate dehydrogenase | AO062_21375 | Not Available | Positive | 4630636 - 4632984 | 85016.1 |
| guanine-specific ribonuclease n1 and t1 | AO062_21380 | Not Available | Positive | 4633165 - 4633578 | 14978.7 |
| barnase inhibitor | AO062_21385 | Not Available | Positive | 4633635 - 4634054 | 15842.8 |
| 16s rrna methyltransferase | AO062_21390 | Not Available | Negative | 4634339 - 4635106 | 28422.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
