Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO062_21195 | Not Available | Negative | 4589380 - 4590522 | 39975.0 |
| receptor | AO062_21200 | Not Available | Negative | 4590974 - 4591966 | 33626.4 |
| amidohydrolase | AO062_21205 | Not Available | Negative | 4591988 - 4593193 | 43121.3 |
| pirin | AO062_21210 | Not Available | Negative | 4593290 - 4594144 | 30047.6 |
| fmn reductase | AO062_21215 | Not Available | Negative | 4594141 - 4594725 | 21639.0 |
| lysr family transcriptional regulator | AO062_21220 | Not Available | Positive | 4594865 - 4595794 | 33137.9 |
| peptidylprolyl isomerase | AO062_21225 | Not Available | Positive | 4595833 - 4596309 | 17323.8 |
| metal-chelation protein chad | AO062_21230 | Not Available | Negative | 4596378 - 4597952 | 57166.8 |
| extradiol dioxygenase | AO062_21235 | Not Available | Positive | 4598118 - 4598534 | 15288.2 |
| pirin | AO062_21240 | Not Available | Positive | 4598681 - 4599763 | 38932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
