Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | AO062_21145 | Not Available | Positive | 4579680 - 4579949 | 10106.2 |
| dead/deah box helicase | AO062_21150 | Not Available | Positive | 4580071 - 4581513 | 51982.9 |
| hypothetical protein | AO062_21155 | Not Available | Positive | 4581871 - 4582194 | 11939.1 |
| transcriptional regulator | AO062_21160 | Not Available | Negative | 4582207 - 4583094 | 31856.4 |
| abc transporter permease | AO062_21165 | Not Available | Positive | 4583184 - 4584074 | 30903.9 |
| fatty acid desaturase | AO062_21170 | Not Available | Negative | 4584079 - 4585005 | 35259.9 |
| gntr family transcriptional regulator | AO062_21175 | Not Available | Negative | 4585085 - 4585753 | 24240.3 |
| pyridine nucleotide-disulfide oxidoreductase | AO062_21180 | Not Available | Negative | 4585798 - 4587072 | 43570.4 |
| d-amino acid oxidase | AO062_21185 | Not Available | Negative | 4587314 - 4588417 | 38675.5 |
| hydroxyproline-2-epimerase | AO062_21190 | Not Available | Negative | 4588429 - 4589364 | 32636.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
