Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | AO062_20945 | Not Available | Negative | 4538292 - 4538807 | 16980.2 |
| 3',5'-cyclic-nucleotide phosphodiesterase | AO062_20950 | Not Available | Negative | 4539010 - 4539813 | 29259.2 |
| guanylate cyclase | AO062_20955 | Not Available | Negative | 4539843 - 4542104 | 80576.5 |
| hypothetical protein | AO062_20960 | Not Available | Negative | 4542177 - 4542827 | 22435.1 |
| protein phosphatase | AO062_20965 | Not Available | Negative | 4542901 - 4543710 | 28650.5 |
| hypothetical protein | AO062_20970 | Not Available | Negative | 4543740 - 4544423 | 23975.3 |
| succinate--coa ligase | AO062_20975 | Not Available | Negative | 4544540 - 4545433 | 31072.8 |
| succinyl-coa synthetase subunit beta | AO062_20980 | Not Available | Negative | 4545444 - 4546610 | 41234.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | AO062_20985 | Not Available | Positive | 4546818 - 4547741 | 33023.2 |
| acetyl-coa hydrolase | AO062_20990 | Not Available | Negative | 4547801 - 4549300 | 53795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
