Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | AO062_20595 | Not Available | Positive | 4455883 - 4456359 | 17502.1 |
| hypothetical protein | AO062_20600 | Not Available | Negative | 4456433 - 4456792 | 12675.6 |
| hypothetical protein | AO062_20605 | Not Available | Negative | 4456890 - 4457279 | 13308.1 |
| gtp-binding protein | AO062_20610 | Not Available | Negative | 4457276 - 4457818 | 19254.3 |
| hypothetical protein | AO062_20615 | Not Available | Negative | 4457832 - 4458455 | 22189.8 |
| hypothetical protein | AO062_20620 | Not Available | Positive | 4458657 - 4459379 | 24880.8 |
| abc transporter substrate-binding protein | AO062_20625 | Not Available | Positive | 4459459 - 4460217 | 27040.4 |
| amino acid abc transporter permease | AO062_20630 | Not Available | Positive | 4460311 - 4461081 | 28745.7 |
| arabinose abc transporter permease | AO062_20635 | Not Available | Positive | 4461112 - 4462737 | 58351.3 |
| cytochrome c oxidase subunit iv | AO062_20640 | Not Available | Negative | 4462747 - 4463070 | 12217.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
