Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_20545 | Not Available | Negative | 4441806 - 4442303 | 18694.1 |
| peptide deformylase | AO062_20550 | Not Available | Negative | 4442300 - 4442821 | 19290.4 |
| peptidoglycan-binding protein | AO062_20555 | Not Available | Positive | 4442982 - 4444205 | 44381.9 |
| dna processing protein dpra | AO062_20560 | Not Available | Positive | 4444239 - 4445381 | 39253.2 |
| protein smg | AO062_20565 | Not Available | Positive | 4445441 - 4445977 | 19595.1 |
| hypothetical protein | AO062_20570 | Not Available | Negative | 4446033 - 4448432 | 86399.6 |
| preprotein translocase subunit secf | AO062_20575 | Not Available | Negative | 4448545 - 4449507 | 35300.1 |
| preprotein translocase subunit secd | AO062_20580 | Not Available | Negative | 4449526 - 4451409 | 67915.6 |
| preprotein translocase subunit yajc | AO062_20585 | Not Available | Negative | 4451499 - 4451834 | 11725.7 |
| indolepyruvate ferredoxin oxidoreductase | AO062_20590 | Not Available | Negative | 4452093 - 4455704 | 131441.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
