Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_00170 | Not Available | Positive | 32797 - 33396 | 21782.9 |
| plasmid stabilization protein | AO062_00175 | Not Available | Positive | 33511 - 33822 | 10904.7 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | AO062_00180 | Not Available | Positive | 34121 - 35548 | 50818.5 |
| 8-amino-7-oxononanoate synthase | AO062_00185 | Not Available | Positive | 35532 - 36764 | 43405.5 |
| dethiobiotin synthetase | AO062_00190 | Not Available | Positive | 36761 - 37519 | 25966.6 |
| aldo/keto reductase | AO062_00195 | Not Available | Negative | 37502 - 38554 | 38148.8 |
| arac family transcriptional regulator | AO062_00200 | Not Available | Positive | 38791 - 39774 | 36052.7 |
| cyclopropane-fatty-acyl-phospholipid synthase | AO062_00205 | Not Available | Positive | 39937 - 41166 | 45677.1 |
| hypothetical protein | AO062_00210 | Not Available | Negative | 41188 - 41394 | 7582.98 |
| hypothetical protein | AO062_00215 | Not Available | Positive | 41571 - 41771 | 7100.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
