Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | AO062_20295 | Not Available | Negative | 4390149 - 4391795 | 58886.0 |
| iron abc transporter atp-binding protein | AO062_20300 | Not Available | Negative | 4391811 - 4392881 | 38519.6 |
| lysr family transcriptional regulator | AO062_20305 | Not Available | Positive | 4393083 - 4393988 | 33401.3 |
| phosphoserine phosphatase | AO062_20310 | Not Available | Positive | 4393985 - 4394671 | 24816.4 |
| atp-dependent dna helicase recg | AO062_20315 | Not Available | Negative | 4394661 - 4396796 | 77367.7 |
| sugar nucleotide epimerase | AO062_20320 | Not Available | Negative | 4396781 - 4398271 | 53521.1 |
| hypothetical protein | AO062_20325 | Not Available | Negative | 4398268 - 4398951 | 25673.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | AO062_20330 | Not Available | Positive | 4399077 - 4400138 | 38626.3 |
| queuine trna-ribosyltransferase | AO062_20335 | Not Available | Positive | 4402255 - 4403430 | 43372.4 |
| hypothetical protein | AO062_20340 | Not Available | Negative | 4403427 - 4403807 | 13499.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
